Description
protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:9658]
Location
Chromosome 12: 7,060,538-7,064,352 forward strand.
Gene
This transcript is a product of gene ENSG00000111679 - This gene has 25 transcripts
NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDS
PTPN6-001ENST000003994482159ENSP00000382376597Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS41744
PTPN6-008ENST000003189742245ENSP00000326010595Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS44820
PTPN6-014ENST00000538715579ENSP00000438740165Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
PTPN6-015ENST00000536521513ENSP00000444337109Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
PTPN6-018ENST00000543115650ENSP00000443393130Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
PTPN6-021ENST00000542462570ENSP00000440114144Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
PTPN6-023ENST00000541698592ENSP00000445646151Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
PTPN6-201ENST000004479311971ENSP00000415979556Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
PTPN6-202ENST000004560132389ENSP00000391592624Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS44821
PTPN6-013ENST00000536013602ENSP0000044634556Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. -
PTPN6-016ENST00000535462543ENSP0000044104460Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. -
PTPN6-019ENST00000542848656ENSP0000044480558Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. -
PTPN6-004ENST00000539029705No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
PTPN6-005ENST00000537533673No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
PTPN6-007ENST00000542277664No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
PTPN6-010ENST00000543120564No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
PTPN6-011ENST00000540740592No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
PTPN6-012ENST00000545153959No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
PTPN6-017ENST00000544354593No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
PTPN6-025ENST00000534900538No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
PTPN6-002ENST000005437442043No protein product-Retained intronNoncoding transcript containing intronic sequence. -
PTPN6-003ENST000004162152412No protein product-Retained intronNoncoding transcript containing intronic sequence. -
PTPN6-006ENST00000542761795No protein product-Retained intronNoncoding transcript containing intronic sequence. -
PTPN6-022ENST00000539365907No protein product-Retained intronNoncoding transcript containing intronic sequence. -
PTPN6-024ENST00000538318759No protein product-Retained intronNoncoding transcript containing intronic sequence. -

Transcript and Gene level displays

Views in Archive EnsEMBL are separated into gene based views and transcript based views according to which level the information is more appropriately associated with. This view is a transcript level view. To flip between the two sets of views you can click on the Gene and Transcript tabs in the menu bar at the top of the page.

Statistics

Exons: 4 Transcript length: 570 bps Translation length: 144 residues

Ensembl version

ENST00000542462.1

Type

Putative protein coding

Prediction Method
Manual annotation (determined on a case-by-case basis) from the Havana project.
Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000400031 (version 1)