Description
reticulon 3 [Source:HGNC Symbol;Acc:10469]
Location
Chromosome 11: 63,448,972-63,526,015 forward strand.
Gene
This transcript is a product of gene ENSG00000133318 - This gene has 14 transcripts
NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDS
RTN3-001ENST000003399974886ENSP000003441061013Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS8050
RTN3-002ENST000003778194937ENSP000003670501032Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
RTN3-003ENST000005407983124ENSP00000442733920Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
RTN3-005ENST000005379812532ENSP00000440874236Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS8049
RTN3-006ENST000003544971407ENSP00000346492214Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
RTN3-007ENST000003413072524ENSP00000340903241Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS8048
RTN3-009ENST00000543552529ENSP00000442080130Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
RTN3-010ENST00000545432545ENSP00000441614136Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
RTN3-013ENST00000542238735ENSP00000437971185Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.-
RTN3-201ENST000003560002619ENSP00000348279255Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS41664
RTN3-004ENST00000536011992ENSP00000440960123Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. -
RTN3-008ENST00000538995814No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
RTN3-011ENST00000338850493No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -
RTN3-012ENST00000543123712No protein product-Retained intronNoncoding transcript containing intronic sequence. -

Transcript and Gene level displays

Views in Archive EnsEMBL are separated into gene based views and transcript based views according to which level the information is more appropriately associated with. This view is a transcript level view. To flip between the two sets of views you can click on the Gene and Transcript tabs in the menu bar at the top of the page.

Statistics

Exons: 5 Transcript length: 992 bps Translation length: 123 residues

Ensembl version

ENST00000536011.1

Type

Known nonsense mediated decay

Prediction Method
Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.
Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000397848 (version 1)