Description
synaptopodin [Source:HGNC Symbol;Acc:30672]
Location
Chromosome 5: 150,020,220-150,038,782 forward strand.
Gene
This transcript is a product of gene ENSG00000171992 - This gene has 5 transcripts
NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDS
SYNPO-001ENST000003076625374ENSP00000302139903Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS4308
SYNPO-002ENST000003942437063ENSP00000377789929Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS54937
SYNPO-003ENST000005221225098ENSP00000428378929Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS54937
SYNPO-004ENST000005196644571ENSP00000429268685Protein codingA protein coding transcript is a spliced mRNA that leads to a protein product.CCDS54938
SYNPO-005ENST00000518872548No protein product-Processed transcriptNoncoding transcript that does not contain an open reading frame (ORF). -

Transcript and Gene level displays

Views in Archive EnsEMBL are separated into gene based views and transcript based views according to which level the information is more appropriately associated with. This view is a transcript level view. To flip between the two sets of views you can click on the Gene and Transcript tabs in the menu bar at the top of the page.

Statistics

Exons: 3 Transcript length: 5,374 bps Translation length: 903 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4308

Ensembl version

ENST00000307662.4

Type

Known protein coding

Prediction Method
Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.
Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000252370 (version 1)