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Bio::EnsEMBL::Analysis::RunnableDB::Accumulator
Bio::EnsEMBL::Analysis::Runnable::Funcgen::ACME
Bio::EnsEMBL::Analysis::RunnableDB::Funcgen::ACME
Bio::EnsEMBL::Analysis::RunnableDB::AlignAffyProbes
Bio::EnsEMBL::Analysis::RunnableDB::AlignmentChains
Bio::EnsEMBL::Analysis::Runnable::AlignmentChains
Bio::EnsEMBL::Analysis::RunnableDB::AlignmentFilter
Bio::EnsEMBL::Analysis::RunnableDB::AlignmentNets
Bio::EnsEMBL::Analysis::Runnable::AlignmentNets
Bio::EnsEMBL::Analysis::Runnable::Finished::Augustus
Bio::EnsEMBL::Analysis::RunnableDB::Finished::Augustus
Bio::EnsEMBL::Analysis::RunnableDB::Bam2Genes
Bio::EnsEMBL::Analysis::RunnableDB::Bam2Introns
Bio::EnsEMBL::Analysis::Runnable::Bam2Introns
Bio::EnsEMBL::Analysis::Runnable::BaseAbInitio
Bio::EnsEMBL::Analysis::Runnable::BaseExonerate
Bio::EnsEMBL::Analysis::RunnableDB::BaseGeneBuild
Bio::EnsEMBL::Analysis::Tools::BasicFilter
Bio::EnsEMBL::Analysis::RunnableDB::BestPmatch
Bio::EnsEMBL::Analysis::Runnable::BestPmatch
Bio::EnsEMBL::Analysis::RunnableDB::BestTargetted
Bio::EnsEMBL::Analysis::Runnable::BestTargettedExonerate
Bio::EnsEMBL::Analysis::Runnable::Finished::Blast
Bio::EnsEMBL::Analysis::RunnableDB::Blast
Bio::EnsEMBL::Analysis::RunnableDB::Finished::Blast
Bio::EnsEMBL::Analysis::Runnable::Blast
Bio::EnsEMBL::Analysis::Tools::BlastDB
Bio::EnsEMBL::Analysis::Tools::BlastDBTracking
Bio::EnsEMBL::Analysis::Runnable::Finished::BlastExonerate
Bio::EnsEMBL::Analysis::RunnableDB::Finished::BlastExonerate
Bio::EnsEMBL::Analysis::RunnableDB::BlastGenscanDNA
Bio::EnsEMBL::Analysis::RunnableDB::BlastGenscanPep
Bio::EnsEMBL::Analysis::Runnable::BlastMiniBuilder
Bio::EnsEMBL::Analysis::Runnable::BlastMiniGenewise
Bio::EnsEMBL::Analysis::Tools::Filter::BlastMiniGenewise
Bio::EnsEMBL::Analysis::RunnableDB::BlastMiniGenewise
Bio::EnsEMBL::Analysis::Config::GeneBuild::BlastMiniGenewise
Bio::EnsEMBL::Analysis::Runnable::BlastmiRNA
Bio::EnsEMBL::Analysis::RunnableDB::BlastmiRNA
Bio::EnsEMBL::Analysis::Runnable::BlastPep
Bio::EnsEMBL::Analysis::RunnableDB::BlastPep
Bio::EnsEMBL::Analysis::Runnable::BlastRfam
Bio::EnsEMBL::Analysis::RunnableDB::BlastRfam
Bio::EnsEMBL::Analysis::RunnableDB::BlastRNASeqPep
Bio::EnsEMBL::Analysis::Runnable::BlastTranscriptDNA
Bio::EnsEMBL::Analysis::RunnableDB::BlastTranscriptDNA
Bio::EnsEMBL::Analysis::Runnable::BlastTranscriptPep
Bio::EnsEMBL::Analysis::RunnableDB::BlastTranscriptPep
Bio::EnsEMBL::Analysis::Runnable::Blastz
Bio::EnsEMBL::Analysis::Tools::Blastz
Bio::EnsEMBL::Analysis::Runnable::Blat
Bio::EnsEMBL::Analysis::Tools::BPlite
Bio::EnsEMBL::Analysis::Tools::BPliteWrapper
Bio::EnsEMBL::Analysis::Tools::Finished::BPliteWrapper
Bio::EnsEMBL::Analysis::Runnable::BWA
Bio::EnsEMBL::Analysis::RunnableDB::BWA
Bio::EnsEMBL::Analysis::Runnable::BWA2BAM
Bio::EnsEMBL::Analysis::RunnableDB::BWA2BAM
Bio::EnsEMBL::Analysis::Tools::CdnaUpdateTranscriptFilter
Bio::EnsEMBL::Analysis::Tools::WGA2Genes::ChainUtils
Bio::EnsEMBL::Analysis::Runnable::Funcgen::Chipotle
Bio::EnsEMBL::Analysis::RunnableDB::Funcgen::Chipotle
Bio::EnsEMBL::Analysis::RunnableDB::Finished::ClusterDepthFilter
Bio::EnsEMBL::Analysis::Tools::ClusterFilter
Bio::EnsEMBL::Analysis::Tools::Algorithms::ClusterUtils
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Coil
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Coil
Bio::EnsEMBL::Analysis::RunnableDB::CollapseAffyProbes
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::CollapsedCluster
Bio::EnsEMBL::Analysis::Tools::ConfigUtils
Bio::EnsEMBL::Analysis::Tools::Pmatch::ContigHit
Bio::EnsEMBL::Analysis::Tools::Pmatch::CoordPair
Bio::EnsEMBL::Analysis::Tools::WGA2Genes::CoordUtils
Bio::EnsEMBL::Analysis::RunnableDB::CopyGenes
Bio::EnsEMBL::Analysis::Runnable::CPG
Bio::EnsEMBL::Analysis::RunnableDB::CPG
Bio::EnsEMBL::Analysis::Runnable::CrossMatch
Bio::EnsEMBL::Analysis::Tools::Otter::DBSQL::DBAdaptor
Bio::EnsEMBL::Analysis::RunnableDB::Finished::DepthFilter
Bio::EnsEMBL::Analysis::Tools::Otter::DnaAlignFeature
Bio::EnsEMBL::Analysis::Tools::Otter::DBSQL::DnaAlignFeatureAdaptor
Bio::EnsEMBL::Analysis::Tools::Otter::DnaAlignFeatureHistory
Bio::EnsEMBL::Analysis::Tools::Otter::DBSQL::DnaAlignFeatureHistoryAdaptor
Bio::EnsEMBL::Analysis::Runnable::Dust
Bio::EnsEMBL::Analysis::RunnableDB::Dust
Bio::EnsEMBL::Analysis::RunnableDB::EnsemblDisableKeys
Bio::EnsEMBL::Analysis::Tools::BlastDBTracking::Entry
Bio::EnsEMBL::Analysis::Runnable::EPCR
Bio::EnsEMBL::Analysis::Runnable::Finished::EPCR
Bio::EnsEMBL::Analysis::RunnableDB::EPCR
Bio::EnsEMBL::Analysis::RunnableDB::Finished::EPCR
Bio::EnsEMBL::Analysis::Runnable::EponineTSS
Bio::EnsEMBL::Analysis::RunnableDB::EponineTSS
Bio::EnsEMBL::Analysis::Runnable::Finished::EST
Bio::EnsEMBL::Analysis::RunnableDB::Finished::EST
Bio::EnsEMBL::Analysis::Runnable::Finished::Est2Genome
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::EvidenceUtils
Bio::EnsEMBL::Analysis::Config::GeneBuild::ExamineGeneSets
Bio::EnsEMBL::Analysis::Tools::Algorithms::ExonCluster
Bio::EnsEMBL::Analysis::Runnable::Finished::Exonerate
Bio::EnsEMBL::Analysis::RunnableDB::Finished::Exonerate
Bio::EnsEMBL::Analysis::RunnableDB::Exonerate2Array
Bio::EnsEMBL::Analysis::RunnableDB::Exonerate2Genes
Bio::EnsEMBL::Analysis::RunnableDB::Exonerate2GenesRegion
Bio::EnsEMBL::Analysis::Runnable::ExonerateAffy
Bio::EnsEMBL::Analysis::Runnable::ExonerateAlignFeature
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateAlignFeature
Bio::EnsEMBL::Analysis::Runnable::ExonerateArray
Bio::EnsEMBL::Analysis::Runnable::ExonerateCloneEnds
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateCloneEnds
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateClones
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateForGenewise
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateForSeleno
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateOrthologueEvaluator
Bio::EnsEMBL::Analysis::Runnable::ExonerateProbe
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateRefineCloneEnds
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateSolexa
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateSolexaCloud
Bio::EnsEMBL::Analysis::Runnable::ExonerateSolexaLocalAlignment
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateSolexaLocalAlignment
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateSolexaTranscript
Bio::EnsEMBL::Analysis::Runnable::ExonerateTags
Bio::EnsEMBL::Analysis::RunnableDB::ExonerateTags
Bio::EnsEMBL::Analysis::Runnable::ExonerateTranscript
Bio::EnsEMBL::Analysis::Tools::ExonerateTranscriptFilter
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::ExonExtended
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::ExonUtils
Bio::EnsEMBL::Analysis::Tools::FeatureFactory
Bio::EnsEMBL::Analysis::Tools::FeatureFilter
Bio::EnsEMBL::Analysis::Runnable::Fgenesh
Bio::EnsEMBL::Analysis::RunnableDB::Fgenesh
Bio::EnsEMBL::Analysis::Tools::FilterBPlite
Bio::EnsEMBL::Analysis::RunnableDB::FilterGenes
Bio::EnsEMBL::Analysis::RunnableDB::FindFalseIntrons
Bio::EnsEMBL::Analysis::RunnableDB::FindMissingOrthologues
Bio::EnsEMBL::Analysis::RunnableDB::FindPartialGenes
Bio::EnsEMBL::Analysis::RunnableDB::FindSplitGenes
Bio::EnsEMBL::Analysis::RunnableDB::Finished
Bio::EnsEMBL::Analysis::Tools::Pmatch::First_PMF
Bio::EnsEMBL::Analysis::Runnable::FirstEF
Bio::EnsEMBL::Analysis::RunnableDB::FirstEF
Bio::EnsEMBL::Analysis::Tools::FragmentTranscriptFilter
Bio::EnsEMBL::Analysis::Runnable::Funcgen
Bio::EnsEMBL::Analysis::RunnableDB::Funcgen
Bio::EnsEMBL::Analysis::Runnable::GenBlast
Bio::EnsEMBL::Analysis::RunnableDB::GenBlast
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Gene3d
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Gene3d
Bio::EnsEMBL::Analysis::Runnable::GeneBuilder
Bio::EnsEMBL::Analysis::RunnableDB::GeneBuilder
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils
Bio::EnsEMBL::Analysis::Tools::Algorithms::GeneCluster
Bio::EnsEMBL::Analysis::Runnable::Genefinder
Bio::EnsEMBL::Analysis::RunnableDB::Genefinder
Bio::EnsEMBL::Analysis::RunnableDB::WGA2Genes::GeneRecord
Bio::EnsEMBL::Analysis::Tools::WGA2Genes::GeneScaffold
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::GeneUtils
Bio::EnsEMBL::Analysis::Runnable::Genewise
Bio::EnsEMBL::Analysis::Runnable::Finished::GenewiseHmm
Bio::EnsEMBL::Analysis::Runnable::Genscan
Bio::EnsEMBL::Analysis::RunnableDB::Genscan
Bio::EnsEMBL::Analysis::Runnable::Finished::HalfwiseHMM
Bio::EnsEMBL::Analysis::RunnableDB::Finished::HalfwiseHMM
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Hamap_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Hamap_wormbase
Bio::EnsEMBL::Analysis::Runnable::HaplotypeMapper
Bio::EnsEMBL::Analysis::RunnableDB::HaplotypeMapper
Bio::EnsEMBL::Analysis::Runnable::HaplotypeProjection
Bio::EnsEMBL::Analysis::RunnableDB::HaplotypeProjection
Bio::EnsEMBL::Analysis::Runnable::HavanaAdder
Bio::EnsEMBL::Analysis::RunnableDB::HavanaAdder
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Hmmpfam
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Hmmpfam
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::HomologyUtils
Bio::EnsEMBL::Analysis::Tools::BPlite::HSP
Bio::EnsEMBL::Analysis::RunnableDB::IgSegBuilder
Bio::EnsEMBL::Analysis::Tools::IgTranscriptFilter
Bio::EnsEMBL::Analysis::Tools::IMGT::SeqIO::imgt_embl
Bio::EnsEMBL::Analysis::RunnableDB::ImportArrays
Bio::EnsEMBL::Analysis::Config::ImportArrays
Bio::EnsEMBL::Analysis::RunnableDB::IncrementalBuild
Bio::EnsEMBL::Analysis::Runnable::Infernal
Bio::EnsEMBL::Analysis::RunnableDB::Infernal
Bio::EnsEMBL::Analysis::Tools::Algorithms::IntronCluster
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::IntronUtils
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::IPRScan
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::IPRScan
Bio::EnsEMBL::Analysis::Tools::BPlite::Iteration
Bio::EnsEMBL::KillList::KillList
Bio::EnsEMBL::Analysis::Runnable::Lagan
Bio::EnsEMBL::Analysis::Runnable::Lastz
Bio::EnsEMBL::Analysis::RunnableDB::LayerAnnotation::Layer
Bio::EnsEMBL::Analysis::RunnableDB::lincRNAEvaluator
Bio::EnsEMBL::Analysis::Runnable::lincRNAEvaluator
Bio::EnsEMBL::Analysis::Runnable::lincRNAFinder
Bio::EnsEMBL::Analysis::RunnableDB::lincRNAFinder
Bio::EnsEMBL::Analysis::Tools::Logger
Bio::EnsEMBL::Analysis::Runnable::LowCoverageGenomeAlignment
Bio::EnsEMBL::Analysis::RunnableDB::MakeCdna2GenomeRegionInputIDs
Bio::EnsEMBL::Analysis::RunnableDB::MakeSimilarityInputIDs
Bio::EnsEMBL::Analysis::RunnableDB::MapCloneEnds
Bio::EnsEMBL::Analysis::Runnable::Funcgen::MAT
Bio::EnsEMBL::Analysis::RunnableDB::Funcgen::MAT
Bio::EnsEMBL::Analysis::Runnable::Mavid
Bio::EnsEMBL::Analysis::Runnable::Mercator
Bio::EnsEMBL::Analysis::Tools::Pmatch::MergedHit
Bio::EnsEMBL::Analysis::Runnable::Finished::MiniEst2Genome
Bio::EnsEMBL::Analysis::Runnable::MiniGenewise
Bio::EnsEMBL::Analysis::Tools::MiniSeq
Bio::EnsEMBL::Analysis::RunnableDB::miRNA
Bio::EnsEMBL::Analysis::Runnable::miRNA
Bio::EnsEMBL::Analysis::RunnableDB::MissingOrthologues
Bio::EnsEMBL::Analysis::Runnable::Mlagan
Bio::EnsEMBL::Analysis::Runnable::MultiMiniGenewise
Bio::EnsEMBL::Analysis::RunnableDB::Funcgen::Nessie
Bio::EnsEMBL::Analysis::Runnable::Funcgen::Nessie
Bio::EnsEMBL::Analysis::Runnable::Ortheus
Bio::EnsEMBL::Analysis::RunnableDB::OrthologueEvaluator
Bio::EnsEMBL::Analysis::Tools::PairAlign
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Panther
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Panther
Bio::EnsEMBL::Analysis::Runnable::Pecan
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Pfam
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Pfam_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Pfam_wormbase
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::PIRSF
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::PIRSF
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::PIRSF_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::PIRSF_wormbase
Bio::EnsEMBL::Analysis::Runnable::Pmatch
Bio::EnsEMBL::Analysis::RunnableDB::Pmatch
Bio::EnsEMBL::Analysis::Config::GeneBuild::Pmatch
Bio::EnsEMBL::Pipeline::Tools::Pmatch::PmatchFeature
Bio::EnsEMBL::Analysis::Tools::PolyAClipping
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Prints
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Prints
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Prints_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Prints_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::ProbeAlign
Bio::EnsEMBL::Analysis::Config::ProbeAlign
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Prodom
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Prodom
Bio::EnsEMBL::Analysis::RunnableDB::ProjectedTranscriptEvidence
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::PrositePattern
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::PrositePattern
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::PrositePattern_wormbase
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::PrositePattern_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::PrositeProfile
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::PrositeProfile
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::PrositeProfile_wormbase
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::PrositeProfile_wormbase
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation
Bio::EnsEMBL::Analysis::Tools::ProteinAnnotationFilter
Bio::EnsEMBL::Analysis::Tools::Pmatch::ProteinHit
Bio::EnsEMBL::Analysis::Runnable::Pseudogene
Bio::EnsEMBL::Analysis::Runnable::Pseudogene2x
Bio::EnsEMBL::Analysis::RunnableDB::Pseudogene2x
Bio::EnsEMBL::Analysis::RunnableDB::Pseudogene_DB
Bio::EnsEMBL::Analysis::RunnableDB::PSILC
Bio::EnsEMBL::Analysis::Runnable::PSILC
Bio::EnsEMBL::Analysis::Runnable::PSILC_BlastP
ReadBaseDataFromGff
Bio::EnsEMBL::Analysis::RunnableDB::RecoverFalseIntrons
Bio::EnsEMBL::Analysis::RunnableDB::RefineSolexaGenes
Bio::EnsEMBL::Analysis::Runnable::RepeatMasker
Bio::EnsEMBL::Analysis::RunnableDB::RepeatMasker
Bio::EnsEMBL::Analysis::RunnableDB::Finished::RepeatMasker
Bio::EnsEMBL::Analysis::Runnable::Finished::RepeatMasker
Bio::EnsEMBL::Analysis::Tools::IMGT::Seq::RichSeqIMGT
Bio::EnsEMBL::Analysis::Runnable::RNAFold
Bio::EnsEMBL::Analysis::Runnable
Bio::EnsEMBL::Analysis::RunnableDB
Bio::EnsEMBL::Analysis::Tools::S3Utils
Bio::EnsEMBL::Analysis::Runnable::Sam2Bam
Bio::EnsEMBL::Analysis::RunnableDB::Sam2Bam
Bio::EnsEMBL::Analysis::Tools::BPlite::Sbjct
Bio::EnsEMBL::Pipeline::Tools::Pmatch::Second_PMF
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Seg
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Seg
Bio::EnsEMBL::Analysis::Config::SelenoBuild
Bio::EnsEMBL::Analysis::RunnableDB::SelenoBuilder
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Signalp
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Signalp
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Smart_wormbase
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Smart_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::Snap
Bio::EnsEMBL::Analysis::Runnable::Snap
Bio::EnsEMBL::Analysis::RunnableDB::Solexa2Genes
Bio::EnsEMBL::Analysis::RunnableDB::Solexa2GenesLiteNew
Bio::EnsEMBL::Analysis::RunnableDB::Solexa2GenesLiteNewCloud
Bio::EnsEMBL::Analysis::RunnableDB::Spliced_elsewhere
Bio::EnsEMBL::Analysis::Runnable::Spliced_elsewhere
Bio::EnsEMBL::Analysis::Runnable::Funcgen::Splitter
Bio::EnsEMBL::Analysis::RunnableDB::Funcgen::Splitter
Bio::EnsEMBL::Analysis::Tools::Stashes
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Superfamily
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Superfamily
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Superfamily_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Superfamily_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::Funcgen::SWEmbl
Bio::EnsEMBL::Analysis::Runnable::Funcgen::SWEmbl
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Tigrfam_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Tigrfam_wormbase
Bio::EnsEMBL::Analysis::RunnableDB::Funcgen::TileMap
Bio::EnsEMBL::Analysis::Runnable::Funcgen::TileMap
Bio::EnsEMBL::Analysis::RunnableDB::ProteinAnnotation::Tmhmm
Bio::EnsEMBL::Analysis::Runnable::ProteinAnnotation::Tmhmm
Bio::EnsEMBL::Analysis::Tools::Algorithms::TranscriptCluster
Bio::EnsEMBL::Analysis::RunnableDB::TranscriptCoalescer
Bio::EnsEMBL::Analysis::Runnable::TranscriptCoalescer
Bio::EnsEMBL::Analysis::Runnable::TranscriptConsensus
Bio::EnsEMBL::Analysis::RunnableDB::TranscriptConsensus
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::TranscriptExtended
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::TranscriptUtils
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::ConfigDependent::TranscriptUtils
Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::TranslationUtils
Bio::EnsEMBL::Analysis::Runnable::TRF
Bio::EnsEMBL::Analysis::RunnableDB::TRF
Bio::EnsEMBL::Analysis::RunnableDB::Finished::TRF
Bio::EnsEMBL::Analysis::RunnableDB::tRNAscan_SE
Bio::EnsEMBL::Analysis::Runnable::tRNAscan_SE
Bio::EnsEMBL::Analysis::Tools::Utilities
Bio::EnsEMBL::Analysis::RunnableDB::UTR_Builder
Bio::EnsEMBL::Analysis::RunnableDB::WGA2GenesDirect