Archive Ensembl HomeArchive Ensembl Home
Bio::EnsEMBL::Compara::RunnableDB::ObjectFactory Member List
This is the complete list of members for Bio::EnsEMBL::Compara::RunnableDB::ObjectFactory, including all inherited members.
_fisher_yates_shuffle_in_place()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
_get_rows_from_list()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
_get_rows_from_open()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
_get_rows_from_query()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
_substitute_minibatched_rows()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
_substitute_rows()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
analysis()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
Bio::catch()Bio::EnsEMBL::Utils::Exception
Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable::catch()Bio::EnsEMBL::Utils::Exception
check_if_exit_cleanly()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
compara_dba()Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable
data_dbc()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
dataflow_output_id()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
db()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
dbc()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
debug()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
Bio::deprecate()Bio::EnsEMBL::Utils::Exception
Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable::deprecate()Bio::EnsEMBL::Utils::Exception
DESTROY()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
fetch_input()Bio::EnsEMBL::Compara::RunnableDB::ObjectFactory
go_figure_compara_dba()Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable
go_figure_dbc()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
Bio::info()Bio::EnsEMBL::Utils::Exception
Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable::info()Bio::EnsEMBL::Utils::Exception
input_id()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
input_job()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
new()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
output()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
param()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
param_defaults()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
param_substitute()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
parameters()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
queen()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
run()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
runnable()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
Bio::stack_trace()Bio::EnsEMBL::Utils::Exception
Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable::stack_trace()Bio::EnsEMBL::Utils::Exception
Bio::stack_trace_dump()Bio::EnsEMBL::Utils::Exception
Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable::stack_trace_dump()Bio::EnsEMBL::Utils::Exception
strict_hash_format()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
Bio::throw()Bio::EnsEMBL::Utils::Exception
Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable::throw()Bio::EnsEMBL::Utils::Exception
Bio::try()Bio::EnsEMBL::Utils::Exception
Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable::try()Bio::EnsEMBL::Utils::Exception
Bio::verbose()Bio::EnsEMBL::Utils::Exception
Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable::verbose()Bio::EnsEMBL::Utils::Exception
warning()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
worker()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
worker_temp_directory()Bio::EnsEMBL::Hive::RunnableDB::JobFactory
write_output()Bio::EnsEMBL::Hive::RunnableDB::JobFactory