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Bio::EnsEMBL::DBSQL::DnaAlignFeatureAdaptor Member List
This is the complete list of members for
Bio::EnsEMBL::DBSQL::DnaAlignFeatureAdaptor
, including all inherited members.
_check_start_end_strand
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_columns
()
Bio::EnsEMBL::DBSQL::DnaAlignFeatureAdaptor
_create_feature
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_create_feature_fast
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_default_where_clause
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
_final_clause
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
_left_join
()
Bio::EnsEMBL::DBSQL::DnaAlignFeatureAdaptor
_list_dbIDs
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
_list_seq_region_ids
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_logic_name_to_constraint
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_max_feature_length
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_objs_from_sth
()
Bio::EnsEMBL::DBSQL::DnaAlignFeatureAdaptor
_pre_store
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_pre_store_userdata
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_remap
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_slice_feature_cache
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_slice_fetch
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
_straight_join
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
_tables
()
Bio::EnsEMBL::DBSQL::DnaAlignFeatureAdaptor
bind_param_generic_fetch
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
clear_cache
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
db
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
dbc
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
dump_data
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
fetch_all
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
fetch_all_by_dbID_list
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
fetch_all_by_hit_name
()
Bio::EnsEMBL::DBSQL::BaseAlignFeatureAdaptor
fetch_all_by_hit_name_unversioned
()
Bio::EnsEMBL::DBSQL::BaseAlignFeatureAdaptor
fetch_all_by_logic_name
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
fetch_all_by_RawContig
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
fetch_all_by_RawContig_and_pid
()
Bio::EnsEMBL::DBSQL::BaseAlignFeatureAdaptor
fetch_all_by_RawContig_and_score
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
fetch_all_by_RawContig_constraint
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
fetch_all_by_Slice
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
fetch_all_by_Slice_and_external_db
()
Bio::EnsEMBL::DBSQL::BaseAlignFeatureAdaptor
fetch_all_by_Slice_and_hcoverage
()
Bio::EnsEMBL::DBSQL::BaseAlignFeatureAdaptor
fetch_all_by_Slice_and_pid
()
Bio::EnsEMBL::DBSQL::BaseAlignFeatureAdaptor
fetch_all_by_Slice_and_score
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
fetch_all_by_Slice_constraint
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
fetch_by_dbID
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
fetch_Iterator_by_Slice
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
fetch_Iterator_by_Slice_method
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
generic_fetch
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
get_dumped_data
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
get_seq_region_id_external
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
get_seq_region_id_internal
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
is_multispecies
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
last_insert_id
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
list_dbIDs
()
Bio::EnsEMBL::DBSQL::DnaAlignFeatureAdaptor
new
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
prepare
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
remove
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
remove_by_analysis_id
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
remove_by_feature_id
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
remove_by_RawContig
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
remove_by_Slice
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
save
()
Bio::EnsEMBL::DBSQL::DnaAlignFeatureAdaptor
species_id
()
Bio::EnsEMBL::DBSQL::BaseAdaptor
start_equals_end
()
Bio::EnsEMBL::DBSQL::BaseFeatureAdaptor
store
()
Bio::EnsEMBL::DBSQL::DnaAlignFeatureAdaptor
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