Archive Ensembl HomeArchive Ensembl Home
Full Class List
Exhaustive list of all classes in the code
Bio::EnsEMBL::Variation::Allele
Bio::EnsEMBL::Variation::DBSQL::AlleleAdaptor
Bio::EnsEMBL::Variation::AlleleFeature
Bio::EnsEMBL::Variation::DBSQL::AlleleFeatureAdaptor
Bio::EnsEMBL::Variation::DBSQL::AttributeAdaptor
Bio::EnsEMBL::Variation::DBSQL::BaseAdaptor
Bio::EnsEMBL::Variation::DBSQL::BaseGenotypeAdaptor
Bio::EnsEMBL::Variation::Pipeline::ProteinFunction::BaseProteinFunction
Bio::EnsEMBL::Variation::BaseStructuralVariation
Bio::EnsEMBL::Variation::DBSQL::BaseStructuralVariationAdaptor
Bio::EnsEMBL::Variation::BaseVariationFeature
Bio::EnsEMBL::Variation::BaseVariationFeatureOverlap
Bio::EnsEMBL::Variation::BaseVariationFeatureOverlapAllele
Bio::EnsEMBL::Variation::Pipeline::BaseVariationProcess
Bio::EnsEMBL::Variation::Utils::BaseVepFilterPlugin
Bio::EnsEMBL::Variation::Utils::BaseVepPlugin
Bio::EnsEMBL::Variation::Utils::ComparaUtils
Bio::EnsEMBL::Variation::Utils::Condel
Bio::EnsEMBL::Variation::Utils::CondelConstants
Bio::EnsEMBL::Variation::Utils::Config
Bio::EnsEMBL::Variation::ConsequenceType
Bio::EnsEMBL::Variation::Pipeline::ProteinFunction::Constants
Bio::EnsEMBL::Variation::Utils::Constants
Bio::EnsEMBL::Variation::DBSQL::DBAdaptor
Bio::EnsEMBL::Variation::Utils::dbSNP
Bio::EnsEMBL::Variation::ExternalFeatureVariation
Bio::EnsEMBL::Variation::ExternalFeatureVariationAllele
Bio::EnsEMBL::Variation::Failable
Bio::EnsEMBL::Variation::Pipeline::FinishVariationClass
Bio::EnsEMBL::Variation::Genotype
Bio::EnsEMBL::Variation::GenotypeCode
Bio::EnsEMBL::Variation::DBSQL::GenotypeCodeAdaptor
Bio::EnsEMBL::Variation::Individual
Bio::EnsEMBL::Variation::DBSQL::IndividualAdaptor
Bio::EnsEMBL::Variation::IndividualGenotype
Bio::EnsEMBL::Variation::DBSQL::IndividualGenotypeAdaptor
Bio::EnsEMBL::Variation::IndividualGenotypeFeature
Bio::EnsEMBL::Variation::DBSQL::IndividualGenotypeFeatureAdaptor
Bio::EnsEMBL::Variation::Pipeline::ProteinFunction::InitJobs
Bio::EnsEMBL::Variation::Pipeline::InitTranscriptEffect
Bio::EnsEMBL::Variation::Pipeline::InitVariationClass
Bio::EnsEMBL::Variation::IntergenicVariation
Bio::EnsEMBL::Variation::IntergenicVariationAllele
Bio::EnsEMBL::Variation::LDFeatureContainer
Bio::EnsEMBL::Variation::DBSQL::LDFeatureContainerAdaptor
Bio::EnsEMBL::Variation::DBSQL::MetaContainer
Bio::EnsEMBL::Variation::MotifFeatureVariation
Bio::EnsEMBL::Variation::MotifFeatureVariationAllele
Bio::EnsEMBL::Variation::OverlapConsequence
Bio::EnsEMBL::Variation::Population
Bio::EnsEMBL::Variation::DBSQL::PopulationAdaptor
Bio::EnsEMBL::Variation::PopulationGenotype
Bio::EnsEMBL::Variation::DBSQL::PopulationGenotypeAdaptor
Bio::EnsEMBL::Variation::Pipeline::ProteinFunction::ProteinFunction_conf
Bio::EnsEMBL::Variation::ProteinFunctionPredictionMatrix
Bio::EnsEMBL::Variation::DBSQL::ProteinFunctionPredictionMatrixAdaptor
Bio::EnsEMBL::Variation::ReadCoverage
Bio::EnsEMBL::Variation::DBSQL::ReadCoverageAdaptor
Bio::EnsEMBL::Variation::ReadCoverageCollection
Bio::EnsEMBL::Variation::DBSQL::ReadCoverageCollectionAdaptor
Bio::EnsEMBL::Variation::Pipeline::RebuildIndexes
Bio::EnsEMBL::Variation::RegulationVariation
Bio::EnsEMBL::Variation::RegulatoryFeatureVariation
Bio::EnsEMBL::Variation::RegulatoryFeatureVariationAllele
Bio::EnsEMBL::Variation::Pipeline::ProteinFunction::RunPolyPhen
Bio::EnsEMBL::Variation::Pipeline::ProteinFunction::RunSift
Bio::EnsEMBL::Variation::Pipeline::ProteinFunction::RunWeka
Bio::EnsEMBL::Variation::Sample
Bio::EnsEMBL::Variation::DBSQL::SampleAdaptor
Bio::EnsEMBL::Variation::Utils::Sequence
Bio::EnsEMBL::Variation::Pipeline::SetVariationClass
Bio::EnsEMBL::Variation::StructuralVariation
Bio::EnsEMBL::Variation::DBSQL::StructuralVariationAdaptor
Bio::EnsEMBL::Variation::StructuralVariationAnnotation
Bio::EnsEMBL::Variation::DBSQL::StructuralVariationAnnotationAdaptor
Bio::EnsEMBL::Variation::StructuralVariationFeature
Bio::EnsEMBL::Variation::DBSQL::StructuralVariationFeatureAdaptor
Bio::EnsEMBL::Variation::StructuralVariationOverlap
Bio::EnsEMBL::Variation::StructuralVariationOverlapAllele
Bio::EnsEMBL::Variation::Study
Bio::EnsEMBL::Variation::DBSQL::StudyAdaptor
Bio::EnsEMBL::Variation::SupportingStructuralVariation
Bio::EnsEMBL::Variation::DBSQL::SupportingStructuralVariationAdaptor
Bio::EnsEMBL::Variation::Pipeline::TranscriptEffect
Bio::EnsEMBL::Variation::Pipeline::TranscriptFileAdaptor
Bio::EnsEMBL::Variation::TranscriptVariation
Bio::EnsEMBL::Variation::DBSQL::TranscriptVariationAdaptor
Bio::EnsEMBL::Variation::TranscriptVariationAllele
Bio::EnsEMBL::Variation::Pipeline::UpdateVariationFeature
Bio::EnsEMBL::Variation::Variation
Bio::EnsEMBL::Variation::DBSQL::VariationAdaptor
Bio::EnsEMBL::Variation::VariationAnnotation
Bio::EnsEMBL::Variation::DBSQL::VariationAnnotationAdaptor
Bio::EnsEMBL::Variation::Pipeline::VariationConsequence_conf
Bio::EnsEMBL::Variation::Utils::VariationEffect
Bio::EnsEMBL::Variation::VariationFeature
Bio::EnsEMBL::Variation::DBSQL::VariationFeatureAdaptor
Bio::EnsEMBL::Variation::VariationFeatureOverlap
Bio::EnsEMBL::Variation::DBSQL::VariationFeatureOverlapAdaptor
Bio::EnsEMBL::Variation::VariationFeatureOverlapAllele
Bio::EnsEMBL::Variation::VariationSet
Bio::EnsEMBL::Variation::DBSQL::VariationSetAdaptor
Bio::EnsEMBL::Variation::Utils::VEP