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Human vs Lesser hedgehog tenrec BlastZ alignments

Human (Homo sapiens, GRCh37) and Lesser hedgehog tenrec(Echinops telfairi, TENREC) were aligned using the BlastZ alignment algorithm (Schwartz S et al., Genome Res.;13(1):103-7, Kent WJ et al., Proc Natl Acad Sci U S A., 2003;100(20):11484-9) in Ensembl release 55. Human was used as the reference species. After running BlastZ, the raw BlastZ alignment blocks are chained according to their location in both genomes. During the final netting process, the best sub-chain is chosen in each region on the reference species.

Full list of pairwise alignments

Configuration parameters

No configuration parameters are available

Results

Number of alignment blocks: 1377395

Genome coverage(bp) Coding exon coverage (bp)
Human
709,685,200 out of 3,098,825,702 29,074,994 out of 35,483,623
Lesser hedgehog tenrec
652,087,338 out of 3,833,568,392 20,857,848 out of 25,951,720