Archive Ensembl HomeArchive Ensembl Home

Human vs Dog BlastZ alignments

Human (Homo sapiens, GRCh37) and Dog(Canis familiaris, BROADD2) were aligned using the BlastZ alignment algorithm (Schwartz S et al., Genome Res.;13(1):103-7, Kent WJ et al., Proc Natl Acad Sci U S A., 2003;100(20):11484-9) in Ensembl release 55. Human was used as the reference species. After running BlastZ, the raw BlastZ alignment blocks are chained according to their location in both genomes. During the final netting process, the best sub-chain is chosen in each region on the reference species.

Full list of pairwise alignments

Configuration parameters

No configuration parameters are available


Number of alignment blocks: 2149137

Genome coverage(bp) Coding exon coverage (bp)
1,550,025,180 out of 3,098,825,702 34,295,008 out of 35,483,623
1,460,053,699 out of 2,531,673,953 29,654,969 out of 31,088,517