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Opossum vs Wallaby BlastZ alignments

Opossum (Monodelphis domestica, BROADO5) and Wallaby(Macropus eugenii, Meug_1.0) were aligned using the BlastZ alignment algorithm (Schwartz S et al., Genome Res.;13(1):103-7, Kent WJ et al., Proc Natl Acad Sci U S A., 2003;100(20):11484-9) in Ensembl release 57. Opossum was used as the reference species. After running BlastZ, the raw BlastZ alignment blocks are chained according to their location in both genomes. During the final netting process, the best sub-chain is chosen in each region on the reference species.

Full list of pairwise alignments

Configuration parameters

No configuration parameters are available

Results

Number of alignment blocks: 2212804

Genome coverage(bp) Coding exon coverage (bp)
Opossum
1,364,730,215 out of 3,605,631,728 27,762,522 out of 31,790,129
Wallaby
1,287,999,745 out of 2,955,773,937 20,334,999 out of 25,589,509