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o*Bio::EnsEMBL::Compara::StableId::Adaptor

o*Bio::EnsEMBL::Compara::AlignSlice

o*Bio::EnsEMBL::Compara::Production::EPOanchors::AnchorAlign

o*Bio::EnsEMBL::Compara::Attribute

o+Bio::EnsEMBL::DBSQL::BaseAdaptor [external]

|o*Bio::EnsEMBL::Compara::DBSQL::AlignSliceAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::AnchorAlignAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::AnchorSeqAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::AttributeAdaptor

|o+Bio::EnsEMBL::Compara::DBSQL::BaseRelationAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::ConservationScoreAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::ConstrainedElementAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::DnaAlignFeatureAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::DnaFragAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::DnaFragRegionAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::GenomeDBAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::GenomicAlignAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::GenomicAlignBlockAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::GenomicAlignGroupAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::MemberAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::MethodLinkSpeciesSetAdaptor

|o+Bio::EnsEMBL::Compara::DBSQL::NestedSetAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::PeptideAlignFeatureAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::SequenceAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::SitewiseOmegaAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::SpeciesSetAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::SpeciesTreeAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::SubsetAdaptor

|o*Bio::EnsEMBL::Compara::DBSQL::SyntenyRegionAdaptor

|o*Bio::EnsEMBL::Compara::Production::DBSQL::AnchorAlignAdaptor

|o*Bio::EnsEMBL::Compara::Production::DBSQL::AnchorSeqAdaptor

|o*Bio::EnsEMBL::Compara::Production::DBSQL::DnaCollectionAdaptor

|o*Bio::EnsEMBL::Compara::Production::DBSQL::DnaFragChunkAdaptor

|\*Bio::EnsEMBL::Compara::Production::DBSQL::DnaFragChunkSetAdaptor

o+Bio::EnsEMBL::Compara::BaseGenomicAlignSet

o+Bio::EnsEMBL::Compara::BaseRelation

o+Bio::EnsEMBL::Compara::Production::Projection::Writer::BaseWriter

o+Bio::EnsEMBL::Compara::Graph::BaseXMLWriter

o*Bio::EnsEMBL::Compara::Filter::BestHit

o*Bio::Das::ProServer::SourceAdaptor::compara

o*Bio::EnsEMBL::Compara::Graph::ConnectedComponentGraphs

o*Bio::EnsEMBL::Compara::Graph::ConnectedComponents

o*Bio::Das::ProServer::SourceAdaptor::conservation_score

o*Bio::EnsEMBL::Compara::ConservationScore

o*Bio::Das::ProServer::SourceAdaptor::constrained_element

o*Bio::EnsEMBL::Compara::ConstrainedElement

o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::CreateRules

o+Bio::EnsEMBL::DBSQL::DBAdaptor [external]

o+Bio::EnsEMBL::Hive::DependentOptions [external]

|\+Bio::EnsEMBL::Hive::PipeConfig::HiveGeneric_conf [external]

| o*Bio::EnsEMBL::Compara::PipeConfig::AncestralMerge_conf

| o+Bio::EnsEMBL::Compara::PipeConfig::ComparaGeneric_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::EPO_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::EpoLowCoverage_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::Families_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::GenerateAnchors_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::GeneTreesStableIdAndTreefamXrefs_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::HmmerConstrainedElements_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::ImportUcscChainNet_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::LoadAllMasterGenomeDB_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::LoadCertainGenomeDB_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::MercatorPecan_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::MergeHomologySideTogether_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::MyISAMiseTables_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::ncRNAtrees_conf

| |o+Bio::EnsEMBL::Compara::PipeConfig::PairAligner_conf

| |o+Bio::EnsEMBL::Compara::PipeConfig::ProteinTrees_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::ProteinTreesFromFASTA_conf

| |o*Bio::EnsEMBL::Compara::PipeConfig::SplitAndPartialGenesOnTrees_conf

| |\*Bio::EnsEMBL::Compara::PipeConfig::SplitAndPartialGenesOnTrees_ensembl_genomes_conf

| o*Bio::EnsEMBL::Compara::PipeConfig::DumpMultiAlign_conf

| o*Bio::EnsEMBL::Compara::PipeConfig::DumpTrees_conf

| o*Bio::EnsEMBL::Compara::PipeConfig::ImportNCBItaxonomy_conf

| \*Bio::EnsEMBL::Compara::PipeConfig::MergeHomologyIntoRelease_conf

o*Algorithm::Diff

o*Bio::EnsEMBL::Compara::Production::DnaCollection

o*Bio::EnsEMBL::Compara::DnaFrag

o*Bio::EnsEMBL::Compara::Production::DnaFragChunk

o*Bio::EnsEMBL::Compara::Production::DnaFragChunkSet

o*Bio::EnsEMBL::Compara::DnaFragRegion

o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::DumpLargeNibForChains

o+Bio::EnsEMBL::Utils::Exception [external]

|\+Bio::EnsEMBL::Hive::Process [external]

| o*Bio::EnsEMBL::Compara::Production::EPOanchors::ExonerateAnchors

| o*Bio::EnsEMBL::Compara::Production::EPOanchors::FilterAnchors

| o*Bio::EnsEMBL::Compara::Production::EPOanchors::FindPairwiseOverlaps

| o*Bio::EnsEMBL::Compara::Production::EPOanchors::GetBlastzOverlaps

| o*Bio::EnsEMBL::Compara::Production::EPOanchors::HMMerAnchors

| o*Bio::EnsEMBL::Compara::Production::EPOanchors::RemoveAnchorOverlaps

| o*Bio::EnsEMBL::Compara::Production::EPOanchors::TrimAnchorAlign

| o*Bio::EnsEMBL::Compara::Production::EPOanchors::TrimStoreAnchors

| o+Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::AlignmentProcessing

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::ChunkAndGroupDna

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::CreateAlignmentChainsJobs

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::CreateAlignmentNetsJobs

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::CreateFilterDuplicatesJobs

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::CreateLowCoverageJobs

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::CreateNeighbourNodesJobs

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::CreatePairAlignerJobs

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::CreateSimpleNetsJobs

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::DeleteAlignment

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::DumpDnaCollection

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::FilterDuplicates

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::Gerp

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::ImportAlignment

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::Lagan

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::LowCoverageGenomeAlignment

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::Mavid

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::Mercator

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::Mlagan

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::Ortheus

| o+Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::PairAligner

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::Pecan

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::PhastCons

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::SetInternalIds

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::SetNeighbourNodes

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::StoreSequence

| o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::UpdateMaxAlignmentLength

| o+Bio::EnsEMBL::Compara::RunnableDB::BaseRunnable

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::ChunkRefDnafrags

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::FindStrand

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::HMMer::ChunkDnafrags

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::HMMer::DumpRepeats

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::HMMer::FindRepeatGabs

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::HMMer::HMMsearch

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::HMMer::LoadConsEles

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::HMMer::SplitCeIds

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::ParseEnredo

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::SetGenomeDBLocator

| |o*Bio::EnsEMBL::Compara::Production::EPOanchors::UpdateMaxAlignmentLength

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMemberSequencesIntoFasta

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMultiAlign::Compress

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMultiAlign::CreateChrJobs

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMultiAlign::CreateOtherJobs

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMultiAlign::CreateSuperJobs

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMultiAlign::DumpMultiAlign

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMultiAlign::Emf2Maf

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMultiAlign::InitJobs

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMultiAlign::MD5SUM

| |o*Bio::EnsEMBL::Compara::RunnableDB::DumpMultiAlign::Readme

| |o*Bio::EnsEMBL::Compara::RunnableDB::EpoLowCoverage::CreateDefaultPairwiseMlss

| |o*Bio::EnsEMBL::Compara::RunnableDB::EpoLowCoverage::ImportAlignment

| |o*Bio::EnsEMBL::Compara::RunnableDB::EpoLowCoverage::LowCoverageGenomeAlignment

| |o*Bio::EnsEMBL::Compara::RunnableDB::EpoLowCoverage::SetNeighbourNodes

| |o*Bio::EnsEMBL::Compara::RunnableDB::Families::BlastAndParseDistances

| |o*Bio::EnsEMBL::Compara::RunnableDB::Families::ConsensifyAfamily

| |o*Bio::EnsEMBL::Compara::RunnableDB::Families::LoadUniProtEntries

| |o*Bio::EnsEMBL::Compara::RunnableDB::Families::LoadUniProtIndex

| |o*Bio::EnsEMBL::Compara::RunnableDB::Families::MafftAfamily

| |o*Bio::EnsEMBL::Compara::RunnableDB::Families::ParseMCLintoFamilies

| |o*Bio::EnsEMBL::Compara::RunnableDB::FindCoreRegionLength

| |o*Bio::EnsEMBL::Compara::RunnableDB::FindPartialGenesOnTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::FindSingleGenesOnTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::FindSplitGenesOnTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::GeneTrees::DumpAllHomologiesOrthoXML

| |o*Bio::EnsEMBL::Compara::RunnableDB::GeneTrees::DumpAllTreesOrthoXML

| |o*Bio::EnsEMBL::Compara::RunnableDB::GenomicAlignBlock::Gerp

| |o*Bio::EnsEMBL::Compara::RunnableDB::GenomicAlignBlock::UpdateMaxAlignmentLength

| |o*Bio::EnsEMBL::Compara::RunnableDB::HealthCheck

| |o*Bio::EnsEMBL::Compara::RunnableDB::HomologyGroupingFactory

| |o*Bio::EnsEMBL::Compara::RunnableDB::LoadMembers

| |o*Bio::EnsEMBL::Compara::RunnableDB::LoadOneGenomeDB

| |o*Bio::EnsEMBL::Compara::RunnableDB::MakeSpeciesTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::MemberDisplayLabelUpdater

| |o*Bio::EnsEMBL::Compara::RunnableDB::MercatorPecan::BlastAndParsePAF

| |o*Bio::EnsEMBL::Compara::RunnableDB::MercatorPecan::BlastFactory

| |o*Bio::EnsEMBL::Compara::RunnableDB::MercatorPecan::CheckReuseDB

| |o*Bio::EnsEMBL::Compara::RunnableDB::MercatorPecan::DumpMercatorFiles

| |o*Bio::EnsEMBL::Compara::RunnableDB::MercatorPecan::DumpSubsetIntoFasta

| |o*Bio::EnsEMBL::Compara::RunnableDB::MercatorPecan::Mercator

| |o*Bio::EnsEMBL::Compara::RunnableDB::MercatorPecan::MercatorFileFactory

| |o*Bio::EnsEMBL::Compara::RunnableDB::MercatorPecan::Pecan

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::CAFEAnalysis

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::CAFESpeciesTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::CAFETable

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::GeneStoreNCMembers

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::GenomePrepareNCMembers

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::Infernal

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::Ktreedist

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::NCFastTrees

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::NCGenomicAlignment

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::NCGenomicTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::NCOrthoTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::NCRecoverEPO

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::NCRecoverSearch

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::NCSecStructTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::NCTreeBestMMerge

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::PrepareSecStructModels

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::RFAMClassify

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::RFAMLoadModels

| |o*Bio::EnsEMBL::Compara::RunnableDB::ncRNAtrees::SecStructModelTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::ObjectFactory

| |o*Bio::EnsEMBL::Compara::RunnableDB::Ortheus

| |o+Bio::EnsEMBL::Compara::RunnableDB::PairAligner::AlignmentProcessing

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::ChunkAndGroupDna

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::CreateAlignmentChainsJobs

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::CreateAlignmentNetsJobs

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::CreateFilterDuplicatesJobs

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::CreatePairAlignerJobs

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::DumpDnaCollection

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::FilterDuplicates

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::ImportChains

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::ImportNets

| |o+Bio::EnsEMBL::Compara::RunnableDB::PairAligner::PairAligner

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::PairAlignerConfig

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::ParsePairAlignerConf

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::RemoveAlignmentDataInconsistencies

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::SetInternalIds

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::StoreSequence

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::UcscChainFactory

| |o*Bio::EnsEMBL::Compara::RunnableDB::PairAligner::UcscToEnsemblMapping

| |o*Bio::EnsEMBL::Compara::RunnableDB::PeptideMemberGroupingFactory

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::BlastpWithReuse

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::BuildHMM

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::CheckGenomedbReusability

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::DumpSubsetCreateBlastDB

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::FlowMemberSeq

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::FromScratch::CheckGenomeReuse

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::FromScratch::StoreMembersSequence

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::GroupGenomesUnderTaxa

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::HclusterParseOutput

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::HclusterPrepare

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::Homology_dNdS

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::HomologyGroupingFactory

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::MCoffee

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::MLSSIDFactory

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::NJTREE_PHYML

| |o+Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::OrthoTree

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::OtherParalogs

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::OverallGroupsetQC

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::PerGenomeGroupsetQC

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::QuickTreeBreak

| |o*Bio::EnsEMBL::Compara::RunnableDB::ProteinTrees::Threshold_on_dS

| |o*Bio::EnsEMBL::Compara::RunnableDB::StableIdMapper

| |\*Bio::EnsEMBL::Compara::RunnableDB::TreefamXrefMapper

| o*Bio::EnsEMBL::Compara::RunnableDB::PairwiseSynteny

| o*Bio::EnsEMBL::Compara::RunnableDB::SearchHMM

| \+Bio::EnsEMBL::Hive::RunnableDB::JobFactory [external]

o*Bio::EnsEMBL::Compara::Production::Projection::FakeXrefHolder

o*Bio::EnsEMBL::Compara::Production::GenomicAlignBlock::FilterStack

o*Bio::EnsEMBL::Compara::FormatTree

o*Bio::EnsEMBL::Compara::StableId::Generator

o*Bio::EnsEMBL::Compara::GenomeDB

o*Bio::EnsEMBL::Compara::GenomicAlign

o*Bio::EnsEMBL::Compara::GenomicAlignGroup

o*Bio::EnsEMBL::Compara::Filter::Greedy

o*Bio::EnsEMBL::Compara::StableId::Map

o+Bio::EnsEMBL::Compara::Member

o*Bio::EnsEMBL::Compara::StableId::NamedClusterSet

o*Bio::EnsEMBL::Compara::StableId::NamedClusterSetLink

o*Bio::EnsEMBL::Compara::Graph::NewickParser

o*Bio::EnsEMBL::Compara::PeptideAlignFeature

o+Bio::EnsEMBL::Compara::Production::Projection::Projection

o+Bio::EnsEMBL::Compara::Production::Projection::ProjectionEngine

o*Bio::EnsEMBL::Compara::Production::Projection::RunnableDB::ProjectOntologyXref

o*Bio::EnsEMBL::Compara::Production::Projection::RunnableDB::RunnableLogger

o*Bio::EnsEMBL::Compara::SitewiseOmega

o+Bio::EnsEMBL::Slice [external]

o+Bio::EnsEMBL::Storable [external]

o*Bio::EnsEMBL::Compara::Subset

o*Bio::EnsEMBL::Compara::SyntenyRegion

o+Bio::EnsEMBL::Compara::DBSQL::TagAdaptor

\+Bio::EnsEMBL::Compara::Taggable